NPInter v5.0

Documents functional interactions between noncoding RNAs and biomolecules

Examples: MALAT1, hsa-mir-107, NONHSAG008675, MI0000114, P04637
Molecule Information

Alias

-

Class

mRNA

Ensembl id

ENSG00000206503

Organism

Homo sapiens

Description

Antigen-presenting major histocompatibility complex class I (MHCI) molecule, HLA-A*01 serotype. In complex with B2M/beta 2 microglobulin displays primarily viral and tumor- derived peptides on antigen-presenting cells for recognition by alpha-beta T cell receptor (TCR) on HLA-A*01-restricted CD8- positive T cells, guiding antigen-specific T cell immune response to eliminate infected or transformed cells (PubMed:1402688, PubMed:7504010, PubMed:17189421, PubMed:19177349, PubMed:26758806, PubMed:24395804). May also present self-peptides, although T cells specific for these peptides are usually inactivated to prevent autoreactivity (PubMed:25880248, PubMed:7506728). Both the peptide and the MHC molecule are recognized by TCR, the peptide is responsible for the fine specificity of antigen recognition and MHC residues account for the MHC restriction of T cells. Typically presents intracellular peptide antigens of 8 to 13 amino acids that arise from cytosolic proteolysis via IFNG-induced immunoproteasome or via endopeptidase IDE/insulin-degrading enzyme (PubMed:17189421, PubMed:20364150). Can bind different peptides that share a common structural motif defined by the nature of the peptide anchor residues. HLA-A*01:01 presents a restricted peptide repertoire including viral epitopes derived from IAV NP/nucleoprotein (CTELKLSDY), IAV PB1/polymerase basic protein 1 (VSDGGPNLY), HAdV-11 capsid L3/hexon protein (LTDLGQNLLY) as well as tumor peptide antigens including MAGE1 (EADPTGHSY), MAGEA3 (EVDPIGHLY) and WT1 (TSEKRPFMCAY), all having in common a canonical motif with a negatively charged Asp or Glu residue at position 3 and a Tyr anchor residue at C-terminal (PubMed:1402688, PubMed:7504010, PubMed:17189421, PubMed:20364150, PubMed:25880248, PubMed:30530481, PubMed:24395804, PubMed:26758806). A number of HLA-A*01:01-restricted peptides carry a post-translational modification with oxidation and N-terminal acetylation being the most frequent (PubMed:25880248). Fails to present highly immunogenic peptides from the EBV latent antigens (PubMed:18779413).;Antigen-presenting major histocompatibility complex class I (MHCI) molecule, HLA-A*02 serotype. In complex with B2M/beta 2 microglobulin displays primarily viral and tumor- derived peptides on antigen-presenting cells for recognition by alpha-beta T cell receptor (TCR) on HLA-A*02-restricted CD8- positive T cells, guiding antigen-specific T cell immune response to eliminate infected or transformed cells (PubMed:7694806, PubMed:2784196, PubMed:12138174, PubMed:12796775, PubMed:28250417, PubMed:8906788, PubMed:19542454, PubMed:20619457). May also present self-peptides derived from the signal sequence of secreted or membrane proteins, although T cells specific for these peptides are usually inactivated to prevent autoreactivity (PubMed:7935798). Both the peptide and the MHC molecule are recognized by TCR, the peptide is responsible for the fine specificity of antigen recognition and MHC residues account for the MHC restriction of T cells (PubMed:12796775, PubMed:18275829, PubMed:19542454, PubMed:28250417). Typically presents intracellular peptide antigens of 8 to 11 amino acids that arise from cytosolic proteolysis via IFNG-induced immunoproteasome (PubMed:17079320, PubMed:26929325). Can bind different peptides that share a common structural motif defined by the nature of the peptide anchor residues (PubMed:7935798, PubMed:8906788, PubMed:8805302, PubMed:8630735, PubMed:22245737). HLA-A*02:01, a major allele in human populations, presents immunodominant viral epitopes derived from IAV M/matrix protein 1 (GILGFVFTL), HIV-1 env (TLTSCNTSV), HIV-1 gag-pol (ILKEPVHGV), HTLV-1 Tax (LLFGYPVYV), HBV C/core antigen (FLPSDFFPS), HCMV UL83/pp65 (NLVPMVATV) as well as tumor peptide antigens including MAGEA4 (GVYDGREHTV), WT1 (RMFPNAPYL) and CTAG1A/NY-ESO-1 (SLLMWITQC), all having in common hydrophobic amino acids at position 2 and at C- terminal anchors (PubMed:12796775, PubMed:8805302, PubMed:8630735, PubMed:9177355, PubMed:20619457, PubMed:18275829, PubMed:28250417, PubMed:7694806, PubMed:8906788, PubMed:11502003, PubMed:19542454, PubMed:12138174).;Antigen-presenting major histocompatibility complex class I (MHCI) molecule, HLA-A*03 serotype. In complex with B2M/beta 2 microglobulin displays primarily viral and tumor- derived peptides on antigen-presenting cells for recognition by alpha-beta T cell receptor (TCR) on HLA-A*03-restricted CD8- positive T cells, guiding antigen-specific T cell immune response to eliminate infected or transformed cells (PubMed:2456340, PubMed:7504010, PubMed:7679507, PubMed:9862734, PubMed:19543285, PubMed:21943705). May also present self-peptides derived from the signal sequence of secreted or membrane proteins, although T cells specific for these peptides are usually inactivated to prevent autoreactivity (PubMed:7679507). Both the peptide and the MHC molecule are recognized by TCR, the peptide is responsible for the fine specificity of antigen recognition and MHC residues account for the MHC restriction of T cells. Typically presents intracellular peptide antigens of 8 to 11 amino acids that arise from cytosolic proteolysis via IFNG-induced immunoproteasome (PubMed:27049119). Can bind different peptides that share a common structural motif defined by the nature of the peptide anchor residues. HLA-A*03:01 presents viral epitopes derived from IAV NP (ILRGSVAHK), HIV-1 nef (QVPLRPMTYK), HIV-1 gag-pol (AIFQSSMTK) as well tumor peptide antigens including PMEL (LIYRRRLMK), NODAL (HAYIQSLLK), TRP-2 (RMYNMVPFF), all having in common hydrophobic amino acids at position 2 and LYS or ARG anchor residues at C- terminal (PubMed:7504010, PubMed:7679507, PubMed:9862734, PubMed:19543285, PubMed:21943705). May also display spliced peptides resulting from the ligation of two separate proteasomal cleavage products that are not contiguous in the parental protein (PubMed:27049119).;Involved in the presentation of foreign antigens to the immune system.;Involved in the presentation of foreign antigens to the immune system.;Involved in the presentation of foreign antigens to the immune system.;Involved in the presentation of foreign antigens to the immune system.;Involved in the presentation of foreign antigens to the immune system.;Involved in the presentation of foreign antigens to the immune system.;Involved in the presentation of foreign antigens to the immune system.;Involved in the presentation of foreign antigens to the immune system.;Involved in the presentation of foreign antigens to the immune system.;Involved in the presentation of foreign antigens to the immune system.;Involved in the presentation of foreign antigens to the immune system.;Involved in the presentation of foreign antigens to the immune system.;Involved in the presentation of foreign antigens to the immune system.;Involved in the presentation of foreign antigens to the immune system.;Involved in the presentation of foreign antigens to the immune system.;Involved in the presentation of foreign antigens to the immune system.;Involved in the presentation of foreign antigens to the immune system.;Involved in the presentation of foreign antigens to the immune system.

Interaction Information
Interaction ID Interact With Tissue or Cell line Pubmed Data source