Interaction Profile
Interaction ID
ncRI-50902390
Interaction Molecules
mmu-miR-2139 -- A730098A19Rik
Interaction Level
RNA-RNA
Interaction Class
binding
Data Source
miRanda with Ago CLIP data
Tags
Organism
Mus musculus
Tissue or Cell Type
adult mouse cortex
Experiment
AGO HITS-CLIP; Conserved miRNAs target sites predicted by TargetScan and miRanda overlap with the AGO CLIP dataset
Description
In vivo microRNA-target interactions from adult mouse cortex were identified with CLEAR-CLIP, a modified AGO HITS-CLIP approach that allows direct ligation of microRNA and target within purified, endogenous AGO-RNA complexes; GEO id: GSE104051
Molecule Profile
Alias
A730098A19Rik
Class
lncRNA
Ensembl id
ENSMUSG00000100812
Description
RIKEN cDNA A730098A19 gene
Reference Information
| Pubmed ID | 31340158 | Journal | Cell reports |
|---|---|---|---|
| Title | AGO CLIP Reveals an Activated Network for Acute Regulation of Brain Glutamate Homeostasis in Ischemic Stroke. | ||
| Author | Mariko Kobayashi, Corinne Benakis, Corey Anderson, Michael J Moore, Carrie Poon, Ken Uekawa, Jonathan P Dyke, John J Fak, Aldo Mele, Christopher Y Park, Ping Zhou, Josef Anrather, Costantino Iadecola, Robert B Darnell | ||
Network View