Interaction Profile
Interaction ID
ncRI-50116854
Interaction Molecules
1500012K07Rik -- YTHDC2
Interaction Level
RNA-Protein
Interaction Class
binding
Data Source
High-throughput data
Tags
Organism
Mus musculus
Tissue or Cell Type
testes
Experiment
CLIP-Seq
Description
Mouse testes samples from P8, P10, adult, and Ythdc2-WLA homozygous mutant mice were subjected to CLIP assays to generate YTHDC2-RNA interaction maps; P10; GEO id: GSE190979.
Molecule Profile
Alias
1500012K07Rik
Class
lncRNA
Ensembl id
ENSMUSG00000097247
Description
RIKEN cDNA 1500012K07 gene
Reference Information
| Pubmed ID | 35058317 | Journal | Genes & development |
|---|---|---|---|
| Title | YTHDC2 control of gametogenesis requires helicase activity but not m<sup>6</sup>A binding. | ||
| Author | Yuhki Saito, Ben R Hawley, M Rhyan Puno, Shreya N Sarathy, Christopher D Lima, Samie R Jaffrey, Robert B Darnell, Scott Keeney, Devanshi Jain | ||
Binding Sites
| Binding Site ID | Location | Conservation Score |
|---|---|---|
| 9950292 | chr6:116360600-116360700 | 0.825720 |
Network View