Interaction Profile
Interaction ID
ncRI-50015665
Interaction Molecules
AL592295.4 -- SMN1
Interaction Level
RNA-Protein
Interaction Class
binding
Data Source
High-throughput data
Tags
Organism
Homo sapiens
Tissue or Cell Type
SH-SY5Y
Experiment
HITS-CLIP
Description
binding derived from CLIP-seq dataset(GSE110411)
Molecule Profile
Alias
AL592295.4
Class
lncRNA
Ensembl id
ENSG00000283696
Description
lncRNA
Reference Information
| Pubmed ID | 30165668 | Journal | Nucleic acids research |
|---|---|---|---|
| Title | High-affinity RNA targets of the Survival Motor Neuron protein reveal diverse preferences for sequence and structural motifs. | ||
| Author | Eric W Ottesen, Natalia N Singh, Diou Luo, Ravindra N Singh | ||
Binding Sites
| Binding Site ID | Location | Conservation Score |
|---|---|---|
| 9813934 | chr1:17199050-17199100 | 0.372540 |
Network View