Interaction ID
ncRI-40842517
Interaction Molecules
hsa-miR-548q -- NSUN4
Interaction Level
RNA-RNA
Interaction Class
binding
Data Source
miRanda with Ago CLIP data
Tags
Organism
Homo sapiens
Tissue or Cell Type
motor cortex
Experiment
AGO CLIP
Description
Conserved miRNAs target sites predicted by miRanda overlap with the AGO CLIP dataset
Alias
-
Class
mRNA
Ensembl id
ENSG00000117481
Description
Involved in mitochondrial ribosome assembly. 5- methylcytosine rRNA methyltransferase that probably is involved in mitochondrial ribosome small subunit (SSU) maturation by methylation of mitochondrial 12S rRNA; the function is independent of MTERFD2/MTERF4 and assembled mitochondrial ribosome large subunit (LSU). Targeted to LSU by MTERFD2/MTERF4 and probably is involved in a final step in ribosome biogenesis to ensure that SSU and LSU are assembled. In vitro can methylate 16S rRNA of the LSU; the methylation is enhanced by MTERFD/MTERF4.
| Pubmed ID | 24389009 | Journal | Neuron |
|---|---|---|---|
| Title | Transcriptome-wide discovery of microRNA binding sites in human brain. | ||
| Author | Boudreau RL, Jiang P, Gilmore BL, Spengler RM, Tirabassi R, Nelson JA, Ross CA, Xing Y, Davidson BL | ||
| Molecule | Disease | Data Source |
|---|---|---|
| hsa-miR-548q | breast cancer | MNDR Database |
| hsa-miR-548q | cholangiocarcinoma | MNDR Database |
| hsa-miR-548q | colon cancer | MNDR Database |
| hsa-miR-548q | colorectal cancer | MNDR Database |
| hsa-miR-548q | embryonal cancer | MNDR Database |
| hsa-miR-548q | hepatocellular carcinoma | MNDR Database |
| hsa-miR-548q | Hodgkin's lymphoma | MNDR Database |
| hsa-miR-548q | Liver Neoplasms | MNDR Database |
| hsa-miR-548q | stomach cancer | MNDR Database |