value | count | graph |
---|
NCBI's alignment of the flanking sequences had at least one mismatch or gap. (UCSC's re-alignment of flanking sequences to the genome may be informative -- see below.) | 3 | ************************************************************ |
There are other rsIds at this position with identical variation. | 1 | ******************** |
Allele frequency is given for only one allele and is 100%. A frequent cause, when chromosome counts are small, is that chromosome counts were submitted only for a homozygous non-reference variant from a personal genome. | 1 | ******************** |
There are other rsIds at this position with different variation. | 1 | ******************** |
Allele frequencies are given for alleles that do not match the reported observed alleles. | 1 | ******************** |
A deletion (from the genome) was observed but the annotation spans 0 bases. (UCSC's re-alignment of flanking sequences to the genome may be informative -- see below.) | 1 | ******************** |
An insertion (into the genome) was observed but the annotation spans more than 0 bases. (UCSC's re-alignment of flanking sequences to the genome may be informative -- see below.) | 1 | ******************** |
All observed alleles are single-base, but the annotation spans more than 1 base. (UCSC's re-alignment of flanking sequences to the genome may be informative -- see below.) | 1 | ******************** |
All observed alleles are single-base, but the annotation spans 0 bases. (UCSC's re-alignment of flanking sequences to the genome may be informative -- see below.) | 1 | ******************** |
This single-base substitution is tri-allelic. | 1 | ******************** |
This single-base substitution is quad-allelic. | 1 | ******************** |
Observed allele(s) from dbSNP have unexpected format for the given class. | 1 | ******************** |
Observed allele not given (length too long). | 1 | ******************** |
Observed allele(s) from dbSNP contain IUPAC ambiguous bases. | 1 | ******************** |
UCSC reference allele does not match any observed allele from dbSNP. | 1 | ******************** |
This variant aligns in more than one location. | 1 | ******************** |
The reference allele from dbSNP does not match the UCSC reference allele. | 1 | ******************** |
At least one allele frequency corresponds to a non-integer (+-0.010000) count of chromosomes on which the allele was observed. The reported total sample count for this SNP is probably incorrect. | 1 | ******************** |
The reference allele from dbSNP matches the reverse complement of the UCSC reference allele. | 1 | ******************** |
Allele frequencies do not sum to 1.0 (+-0.010000). This SNP's allele frequency data are probably incomplete. | 1 | ******************** |