Schema for MS SmProt - SmProt genes from mass spectrum

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Schema for MS SmProt - SmProt genes from mass spectrum

Database: hg38 Primary Table: smprot_MS_hg38 Row Count: 5,574 Data last updated: 2020-08-18

field	example	SQL type	info
`bin`	585	`smallint(5) unsigned`	range
`chrom`	chr1	`varchar(255)`	values
`chromStart`	14774	`int(10) unsigned`	range
`chromEnd`	14815	`int(10) unsigned`	range
`name`	MSHSA414403	`varchar(255)`	values
`score`	0	`int(10) unsigned`	range
`strand`	-	`char(1)`	values

Sample Rows

bin	chrom	chromStart	chromEnd	name	score	strand
585	chr1	14774	14815	MSHSA414403	0	-
585	chr1	17320	17358	MSHSA414579	0	-
592	chr1	945519	945575	MSHSA416285	0	-
595	chr1	1402101	1402160	MSHSA414370	0	-
595	chr1	1402200	1402232	MSHSA414371	0	-
595	chr1	1405809	1405838	MSHSA414373	0	-
602	chr1	2303856	2303912	MSHSA414851	0	+
644	chr1	7777214	7777285	MSHSA416179	0	+
644	chr1	7777235	7777285	MSHSA416180	0	+
652	chr1	8831325	8831363	MSHSA416286	0	+

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.