Control track and group visibility more selectively below.
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PhyloCSF Novel v259 |
| PhyloCSF Candidate Coding Regions (PCCRs) Not In WormBase Version WS259 Gene Set |
Smoothed PhyloCSF... |
| Smoothed PhyloCSF |
PhyloCSF-3 |
| Smoothed PhyloCSF Strand - Frame 3 |
PhyloCSF-2 |
| Smoothed PhyloCSF Strand - Frame 2 |
PhyloCSF-1 |
| Smoothed PhyloCSF Strand - Frame 1 |
PhyloCSF+3 |
| Smoothed PhyloCSF Strand + Frame 3 |
PhyloCSF+2 |
| Smoothed PhyloCSF Strand + Frame 2 |
PhyloCSF+1 |
| Smoothed PhyloCSF Strand + Frame 1 |
PhyloCSF Regions... |
| PhyloCSF approximate coding regions |
PhyloCSF-3Regns |
| PhyloCSF approximate coding regions, Strand -, Frame 3 |
PhyloCSF-2Regns |
| PhyloCSF approximate coding regions, Strand -, Frame 2 |
PhyloCSF-1Regns |
| PhyloCSF approximate coding regions, Strand -, Frame 1 |
PhyloCSF+3Regns |
| PhyloCSF approximate coding regions, Strand +, Frame 3 |
PhyloCSF+2Regns |
| PhyloCSF approximate coding regions, Strand +, Frame 2 |
PhyloCSF+1Regns |
| PhyloCSF approximate coding regions, Strand +, Frame 1 |
Raw PhyloCSF... |
| Raw PhyloCSF |
PhyloCSFraw-3 |
| Raw PhyloCSF Strand - Frame 3 |
PhyloCSFraw-2 |
| Raw PhyloCSF Strand - Frame 2 |
PhyloCSFraw-1 |
| Raw PhyloCSF Strand - Frame 1 |
PhyloCSFraw+3 |
| Raw PhyloCSF Strand + Frame 3 |
PhyloCSFraw+2 |
| Raw PhyloCSF Strand + Frame 2 |
PhyloCSFraw+1 |
| Raw PhyloCSF Strand + Frame 1 |
PhyloCSF Power |
| Relative branch length of local alignment, a measure of PhyloCSF statistical power |
Splice Predictions... |
| Splice Predictions |
SplicePred- |
| Splice Predictions For - Strand |
SplicePred+ |
| Splice Predictions For + Strand |
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Base Position |
| Chromosome position in bases. (Clicks here zoom in 3x) |
Assembly |
| Assembly from Fragments |
Gap |
| Gap Locations |
Short Match |
| Perfect Matches to Short Sequence () |
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NCBI RefSeq |
| RefSeq gene predictions from NCBI |
Ribo-seq SmProt ATG |
| SmProt genes with ATG startcodon from Ribosome Profiling |
Ribo-seq SmProt nonATG |
| SmProt genes with non-ATG startcodon from Ribosome Profiling |
database SmProt |
| SmProt genes from other databases |
literature SmProt |
| SmProt genes from literature mining |
NONCODE |
| non-coding RNAs |
Ensembl Genes |
| Ensembl Genes |
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RepeatMasker |
| Repeating Elements by RepeatMasker |
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